In each profile table, the first column is the database identifier followed by 1572 columns sorted by position in the NCBI taxonomy tree. The full taxonomy names matching these columns are here.

Please note that GO tables on the website are direct hits only.

The UniRef clusters are not included here, but you can use the search pages to download subsets of any profile table matching your search criteria (the smallest cluster table, uniRef50, has 2.0 million total rows and is over 5 GB.)

The 77547 BLAST cluster profiles (at 50% identity and 90% coverage) used in Stubben and Duffield et al. 2009 Steps toward broad-spectrum therapeutics: discovering virulence associated genes present in diverse human pathogens can be downloaded here